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QGoSemiAutoSegmentationAlgo.h
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1 /*=========================================================================
2  Authors: The GoFigure Dev. Team.
3  at Megason Lab, Systems biology, Harvard Medical school, 2009-11
4 
5  Copyright (c) 2009-11, President and Fellows of Harvard College.
6  All rights reserved.
7 
8  Redistribution and use in source and binary forms, with or without
9  modification, are permitted provided that the following conditions are met:
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12  this list of conditions and the following disclaimer.
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17  nor the names of its contributors may be used to endorse or promote
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32 
33 =========================================================================*/
34 #ifndef __QGoSemiAutoSegmentationAlgo_h
35 #define __QGoSemiAutoSegmentationAlgo_h
36 
37 #include "QGoSegmentationAlgo.h"
38 #include "QGoAlgorithmWidget.h"
39 #include "QGoGUILibConfigure.h"
40 #include "vtkSmartPointer.h"
41 #include "vtkPolyData.h"
42 #include "vtkImageData.h"
43 #include "QGoGUILibConfigure.h"
44 
45 class GoImageProcessor;
46 
52 class QGOGUILIB_EXPORT QGoSemiAutoSegmentationAlgo:public QGoSegmentationAlgo
53 {
54  Q_OBJECT
55 public:
56  explicit QGoSemiAutoSegmentationAlgo(std::vector< vtkPoints* >* iSeeds, QWidget *iParent = 0);
57  virtual ~QGoSemiAutoSegmentationAlgo();
58 
59 
63  virtual std::vector<vtkPolyData*> ApplyAlgo(
64  GoImageProcessor* iImages,
65  std::string iChannel,
66  bool iIsInvertedOn = false) = 0;
67 
68 protected:
69  std::vector< vtkPoints* >* m_Seeds;
71 
75  virtual void SetAlgoWidget(QWidget* iParent = 0);
76 
77 
81  virtual void DeleteParameters() = 0;
82 
83  /*
84  * \brief Get boundingBox from a center and a radius
85  * \param[in] iCenter center of the box
86  * \param[in] iRadius radius of the box
87  * \param[in] iOrientation 0-xy, 1-xz, 2-yz, 3-xyz
88  * \return vector[6] containing the bounding box (xmin, xmax, ymin, imax, ...)
89  */
90  std::vector<double> GetBounds(
91  const std::vector<double>& iCenter,
92  const double& iRadius,
93  const unsigned int& iOrientation = 3);
94 
95 };
96 
97 #endif
std::vector< vtkPoints * > * m_Seeds
virtual void SetAlgoWidget(QWidget *iParent=0)=0
construct the algowidget with the different parameters
virtual void DeleteParameters()=0
delete the different parameters
abstract class to be the interface between the algorithms for meshes and contours and GoFigure ...
abstract class to be the interface between the semi automatic algorithms for meshes and contours and ...
QGoAlgoParameter< double > * m_Radius
Interface between image reader and vtkImageData.